How exactly did you check the refrigerant level without the compressor operating?
A couple of weeks ago I saved my grandmother about $1050 by replacing her compressor, expansion valve, and receiver/dryer desiccant bag in her '03 Honda CRV. Her a/c was diagnosed by the local dealership as having a defective clutch and they wanted $815 to replace only the clutch. Upon receiving other quotes, the best one was $550. If they replaced the compressor, it would be $1300.
Since I was not unfamiliar with this type of work, I suggested we (uncle and I) replace the compressor because of the age. Partsgeek.com had new parts for $200 shipped. Whenever you replace an a/c compressor, you must replace these other parts also and flush the whole system. This job required removal of the front of the vehicle (bumper, condenser, radiator, etc.) and passenger side dashboard for the expansion valve. Upon removing the compressor, it was apparent that it was not the clutch but the compressor had locked up (glad I decided not to trust the diagnostic from the dealer). The condenser had some nice aluminum shards that flushed out. We also removed all of the hi/lo refrigerant lines and the evaporator to flush them out thoroughly as well.
Without an air compressor, performing a proper flush is about impossible. But if you do, your local AutoZone should have all the loaner tools you need which include - manifold gauges, vacuum pump, and flush gun.
That being said, what I'm not saying that you should not do this, just be aware what the job might entail. If the compressor has failed/locked up, this is not a simple diy procedure and will require removal of the entire a/c system for cleaning and replacing. But if you would like to troubleshoot your issue and verify what the problem might be, here is the service manual for the hvac system.
https://www.dropbox.com/s/zis9b996k44pgkh/WM_07.pdf
Troubleshooting index can be found on page 19.