A check valve is a valve that allows air to flow only one way. Your brake booster relies on the power of the vacuum to help you apply your brakes. Positive pressure is not good for your brake booster. That is why the check valve is there, it allows air to flow away from the brake booster(creating vacuum), but does not allow it to go the other way(losing vacuum, or creating boost). If your wastegate source was placed after a check valve set in this direction, then your wastegate would never see positive pressure(boost), and your turbo would create more and more boost until your engine popped(but hopefully you would hit fuel cut first which somewhat prevents such popping).