Got your PM, mate.
I've done the VTCS removal on two P5's. I removed all the vacuum lines before painting the intake mani's then just replaced everything exactly where it was. Honestly, I don't remember a green/white ball on the IM for the P5's but it won't hurt reinstalling it on there. I also left the VTCS actuator (circled in your pic) bolted up but it doesn't need a vacuum line to it anymore since it isn't functioning anymore. Some people said you have to leave ALL the vacuum hoses attached to it or you will get a CEL. I simply bought some little rubber vacuum caps from Autozone (they were like $2 for a pack of 5) and used two of them for the VTCS solenoid on top of the intake mani to cap off the vacuum lines to the actuator. I can get you some pics if you need them.
Also, when you're putting the intake mani back on, use a new gasket and make sure you tighten those bolts down pretty tight or else you will get a lopey idle from a vacuum leak. That's what I had until I cranked the bolts down. It's been running fine for about 6 months.
If you have any more questions, let me know.